|
|
|
题名
|
作者
|
年代
|
出处
|
被引量
|
| 1 | High-level classification of the Fungi and a tool for evolutionary ecological analyses显示文摘High-throughput sequencing studies generate vast amounts of taxonomic data.Evolutionary ecological hypotheses of the recovered taxa and Species Hypotheses are difficult to test due to problems with alignments and the lack of a phylogenetic backbone.We propose an updated phylum-and class-level fungal classification accounting for monophyly and divergence time so that the main taxonomic ranks are more informative.Based on phylogenies and divergence time estimates,we adopt phylum rank to Aphelidiomycota,Basidiobolomycota,Calcarisporiellomycota,Glomeromycota,Entomophthoromycota,Entorrhizomycota,Kickxellomycota,Monoblepharomycota,Mortierellomycota and Olpidiomycota.We accept nine subkingdoms to accommodate these 18 phyla.We consider the kingdom Nucleariae(phyla Nuclearida and Fonticulida)as a sister group to the Fungi.We also introduce a perl script and a newick-formatted classification backbone for assigning Species Hypotheses into a hierarchical taxonomic framework,using this or any other classification system.We provide an example of testing evolutionary ecological hypotheses based on a global soil fungal data set. | Leho Tedersoo Santiago Sanchez-Ramırez Urmas Koljalg Mohammad Bahram Markus Doring Dmitry Schigel Tom May Martin Ryberg Kessy Abarenkov | 2018 | Fungal Diversity2018，，3： | 7 |
| 2 | 番茄红素热处理异构化方法研究显示文摘番茄红素在受热的情况下会发生反式异构体(all-trans)向顺式异构体(cis-isomers)的转化。本文研究了乙酸乙酯热回流、微波法及超声-微波协同法对番茄红素异构化的影响。结果表明:乙酸乙酯热回流处理后,6%番茄红素油树脂中顺式异构体占比高于90%番茄红素中顺式异构体占比;氮气保护对番茄红素的异构化无明显保护作用;微波对番茄红素异构化有较强的促进作用,处理5 h后顺式占比可以高达54.7%,但超声-微波协同法对番茄红素异构化的影响与微波单独使用时无明显变化。所以微波是较好的番茄红素热处理异构化方法。 | 张环伟 Kessy N.Honest 蒋雅美 张连富 | 2011 | 天然产物研究与开发2011，23，5： | 6 |
| 3 | 1例遗传性血管病、肾病、动脉瘤和肌肉痉挛综合征幼儿的临床特征及COL4A1基因型研究显示文摘遗传性血管病、肾病、动脉瘤和肌肉痉挛(HANAC)综合征是由COL4A1基因变异导致的常染色体显性遗传病,主要表现为脑白质病变、动脉瘤、视网膜动脉迂曲、多囊肾、镜下血尿、肌肉痉挛等。该文报道1例COL4A1基因变异导致HANAC综合征的临床特征及基因型特点。患儿男,1岁8个月,幼儿期隐匿起病,主要表现为发热抽搐、侧脑室旁及双侧半卵圆中心脑白质病变、左侧基底节旁软化灶、视网膜动脉硬化、镜下血尿、肌肉痉挛。全外显子组测序结果证实患儿COL4A1基因存在(NM_001845)c.4150+1(IVS46)G>T致病性杂合新发变异,从而确诊为HANAC综合征。针对不明原因脑白质病变、卒中、血尿、多囊肾、白内障、视网膜动脉迂曲等病变的患儿或有相关家族史的家系,建议完善COL4A1基因检测。 | 单丽丹 彭镜 肖慧 吴丽文 段浩林 庞楠 Kessi Miriam 尹飞 | 2019 | 中国当代儿科杂志2019，21，8： | 4 |
| 4 | Towards a unified paradigm for sequence‐based identification of fungi显示文摘 | Urmas K?ljalg R. Henrik Nilsson Kessy Abarenkov Leho Tedersoo Andy F. S. Taylor Mohammad Bahram Scott T. Bates Thomas D. Bruns Johan Bengtsson‐Palme Tony M. Callaghan Brian Douglas Tiia Drenkhan Ursula Eberhardt Margarita Due?as Tine Grebenc Gareth W. Gri | 2013 | Mol Ecol2013，，21： | 2 |
| 5 | Identifying the ‘unidentified’ fungi: a global-scale long-read third-generation sequencing approach显示文摘Molecular identification methods,in particular high-throughput sequencing tools,have greatly improved our knowledge about fungal diversity and biogeography,but many of the recovered taxa from natural environments cannot be identified to species or even higher taxonomic levels.This study addresses the phylogenetic placement of previously unrecognized fungal groups by using two complementary approaches:(i)third-generation amplicon sequencing analysis of DNA from global soil samples,screening out ITS reads of<90%similarity to other available Sanger sequences,and(ii)analysis of common fungal taxa that were previously indicated to be enigmatic in terms of taxonomic placement based on the ITS sequences alone(so-called top50 sequences).For the global soil samples,we chose to amplify the full rRNA gene operon using four partly overlapping amplicons and multiple newly developed primers or primer combinations that cover nearly all fungi and a vast majority of non-fungal eukaryotes.We extracted the rRNA 18S(SSU)and 28S(LSU)genes and performed phylogenetic analyses against carefully selected reference material.Both SSU and LSU analyses placed most soil sequences and top50 sequences to known orders and classes,but tens of monophyletic groups and single sequences remained outside described taxa.Furthermore,the LSU analyses recovered a few small groups of sequences that may potentially represent novel phyla.We conclude that rRNA genes-based phylogenetic analyses are efficient tools for determining phylogenetic relationships of fungal taxa that cannot be placed to any order or class using ITS sequences alone.However,in many instances,longer rRNA gene sequences and availability of both SSU and LSU reads are needed to improve taxonomic resolution.By leveraging third-generation sequencing from global soil samples,we successfully provided phylogenetic placement for many previously unidentified sequences and broadened our view on the fungal tree of life,with 10-20%new order-level taxa.In addition,the PacBio sequence data greatly extends fungal class-level information in reference databases. | Leho Tedersoo Sten Anslan Mohammad Bahram Urmas Kõljalg Kessy Abarenkov | 2020 | Fungal Diversity2020，，4： | 2 |
| 6 | Human papillomavirus 16 E6 expression disrupts the p53-mediated cellular response to DNA damage 显示文摘 | Kessis TD Slebos RL Nelson WG Kastan MB Plunkett BS Han SM Lorincz AT Hedrick L Cho KR | 1993 | Proc Natl Acad Sci USA1993，90，9： | 1 |
| 7 | Functional consequences of directed mutations in human papillomavirus E6 proteins: abrogation of p53-mediated cell cycle arrest correlates with p53 binding and degradation in vitro显示文摘 | Slebos R J Kessis TD Chen AW | 1995 | Virology1995，208，1： | 1 |
| 8 | Reactions of biological oxidants with selenourea formation of redox active 显示文摘 | KESSI J RAMUZ M WEHRLI E | 1999 | Applied and Environmental Microbiology1999，65，11： | 1 |
| 9 | Similarities between the abiotic reduction of selenite with glutathione and the dissimilatory reaction mediated by Rhodospirillum rubrum and Escherichia coli显示文摘 | Kessi J Hanselmann K W | 2004 | J Biol Chem2004，279，50： | 1 |
| 10 | Dynamic simulation of the performance of an inflatable greenhouse in the southern part of Alberta I : Comparisons with experimental data 显示文摘 | Ahamdi G Kessy K O Glocker P G | 1982 | Agr Meteorol1982，27，： | 1 |
| 11 | Chromate reduction by Rhodobacter sphaeroides显示文摘 | Nepple B B Kessi J Bachofen R | 2000 | Journal of Industrial Microbiol- ogy & Biotechnology2000，25，4： | 1 |
| 12 | Enzymic systems proposed to be involved in the dis- similatory reduction of selenite in the purple non-sulfur bacte- ria Rhodospirillum rubrum and Rhodobacter capsulatus显示文摘 | Kessi J | 2006 | Microbiology2006，152，： | 1 |
| 13 | Enzymic systems proposed to be involved in the dissimilatory reduction of selenite in the purple non-sulfur bacteria Rhodospirillun rubrum and Rhodobacter capsulatus显示文摘 | Kessi J | 2006 | Microbiology2006，152，： | 1 |
| 14 | Reduction of selenite and Detoxification of Elemental Selenium by Phototrophic Bacterium Rhodospirillun rubrum显示文摘 | Kessi J Ramuz M Wehrli E | 1999 | Appl Environ Microbiol1999，65，11： | 1 |
| 15 | Enzymic systems proposed to be involved in the dissimilatory reduction of selenite in the pruple non-sulfur bacteria Rhodospirillum rubrum and Rhodobacter capsulatus显示文摘 | Kessi J | 2006 | Microbiology2006，152，73： | 1 |
| 16 | Chromium reduction by Rhodobocter sphaeroides 显示文摘 | Nepple B B Kessi J Bachofen R | 2000 | Journal of Industrial Microbiology & Biotechnology2000，25，4： | 1 |
| 17 | SLC16A2基因突变致Allan-Herndon-Dudley综合征一家系显示文摘目的总结SLC16A2基因突变致Allan-Herndon-Dudley综合征一家系临床特征、基因突变特点、诊断、治疗及预后。方法总结中南大学湘雅医院儿科2017年11月确诊的Allan-Herndon-Dudley综合征(AHDS)一家系的临床资料。以"艾伦-赫恩登-达得利综合征""Allan-Herndon-Dudley syndrome""AHDS"为关键词查阅在线人类孟德尔遗传数据库(OMIM)和PubMed数据库及中国知识基础设施工程(CNKI)数据库、万方数据库建库至2018年6月相关文献,并对2013年4月至2018年6月的病例报道文献进行总结。结果先证者男,8月龄,临床表现为智力及运动发育迟滞、竖头欠稳、不能独坐、双上肢不能抓物、无语言,长脸、大耳、双眼稍内斜、脊柱侧弯、躯干肌张力低下、四肢肌张力增高、双下肢腱反射亢进;头颅磁共振成像(MRI)示脑外间隙增宽、髓鞘发育延迟;甲状腺功能:三碘甲状腺原氨酸(T3)增高、甲状腺素(T4)降低、促甲状腺激素(TSH)正常;家系全外显子测序发现患儿SLC16A2基因(NM_006517)c.431-1(IVS1)G〉C半合子突变,父亲无基因突变,母亲和外祖母为携带者;先证者舅舅患有严重智力及运动发育迟滞、全身肌张力低下,1岁时不明原因死亡。检索相关文献97篇,最终纳入病例报道文献19篇,共报道42例患者(包括8个家系22例患者及20例散发患者)。已报道的42例患者(均为男性),中至重度认知功能障碍42例,抽搐15例;长期卧床36例,可独走4例;语言缺失31例,可说句子2例,说词语4例,呀呀学语1例;小头畸形16例,面容异常18例,双眼内斜6例,听力障碍2例,脊柱侧弯14例,关节挛缩11例,低体重或肌容量减少30例,全身或躯干肌张力低下37例,病程中出现痉挛性截瘫或肌张力增高32例;甲状腺功能异常33例,其中T3增高30例,T4降低25例,TSH增高3例;头颅MRI示22例髓鞘发育延迟,其中1例随年龄增长髓鞘发育至正常;基因结果:错义突变31例(散发14例),缺失突变5例(散发3例,有1例缺失突变后导致框移突变),插入突变5例(散发2例),重复突变1例(散发)。该病预后不佳,患儿常因呼吸道反复感染而死亡。结论Allan-Herndon-Dudley综合征的主要临床表现为严重发育迟缓,不能抬头、独坐、独站、独走,语言发育延迟至语言缺失,出生后全身肌张力低下、进行性痉挛性截瘫、血清甲状腺激素异常、头颅MRI示髓鞘发育延迟,SLC16A2 c.431-1(IVS1)G〉C突变是其致病原因。 | 唐玉琳 彭镜 熊娟 庞楠 吴丽文 杨海燕 Kessi Miriam 尹飞 | 2018 | 中华儿科杂志2018，56，11： | 1 |
| 18 | Both cell proliferation and apoptosis increase with lesion grade in cervical neoplasia but do not correlate with human papillomavirus type显示文摘 | Isacson C Kessis TD Hedrick L | 1996 | Cancer Res1996，56，4： | 1 |
| 19 | Reduction of selenite and detoxification of elemental selenium by the phototrophic bacterium Rhodospirillum rubrum显示文摘 | KESSI J RAMUZ M WEHRLI E | 1999 | Appl Environ Microbiol1999，65，11： | 1 |
| 20 | Both cell proliferation and apoptosis increases with lesion grade in cervical neoplasia but not correlate with human papillomavirus type显示文摘 | Isaccon C Kessis TD Hedrick L | 1996 | Cancer res1996，，： | 1 |
您所在的机构暂未开通此部分的功能，请联系管理员