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| 1 | A high-density, multi-parental SNP genetic map on apple validates a new mapping approach for outcrossing species显示文摘Quantitative trait loci(QTL)mapping approaches rely on the correct ordering of molecular markers along the chromosomes,which can be obtained from genetic linkage maps or a reference genome sequence.For apple(Malus domestica Borkh),the genome sequence v1 and v2 could not meet this need;therefore,a novel approach was devised to develop a dense genetic linkage map,providing the most reliable marker-loci order for the highest possible number of markers.The approach was based on four strategies:(i)the use of multiple full-sib families,(ii)the reduction of missing information through the use of HaploBlocks and alternative calling procedures for single-nucleotide polymorphism(SNP)markers,(iii)the construction of a single backcross-type data set including all families,and(iv)a two-step map generation procedure based on the sequential inclusion of markers.The map comprises 15417 SNP markers,clustered in 3 K HaploBlock markers spanning 1267 cM,with an average distance between adjacent markers of 0.37 cM and a maximum distance of 3.29 cM.Moreover,chromosome 5 was oriented according to its homoeologous chromosome 10.This map was useful to improve the apple genome sequence,design the Axiom Apple 480 K SNP array and perform multifamily-based QTL studies.Its collinearity with the genome sequences v1 and v3 are reported.To our knowledge,this is the shortest published SNP map in apple,while including the largest number of markers,families and individuals.This result validates our methodology,proving its value for the construction of integrated linkage maps for any outbreeding species. | Erica A Di Pierro Luca Gianfranceschi Mario Di Guardo Herma JJ Koehorst-van Putten Johannes W Kruisselbrink Sara Longhi Michela Troggio Luca Bianco Hélène Muranty Giulia Pagliarani Stefano Tartarini Thomas Letschka Lidia Lozano Luis Larisa Garkava-Gustavsson Diego Micheletti Marco CAM Bink Roeland E Voorrips Ebrahimi Aziz Riccardo Velasco François Laurens W Eric van de Weg | 2016 | Horticulture Research2016，3，1： | 3 |
| 2 | Prokineticin-1 (Prok-1) works coordinately with glial cell line derived neurotrophic factor (GDNF) to mediate proliferation and differentiation of enteric neural crest cells显示文摘 | Ngan E S Shum C K Poon H C Sham M H Garcia-Barcelo M M Lui V C | 2008 | Biochim Biophys Acta2008，1783，： | 1 |
| 3 | Analytical and ex-perimental study of a skew bridge model显示文摘 | MENG Junyi GHASEMI H LUI E M | 2004 | EngineeringStructures2004，26，2： | 1 |
| 4 | Human factors as a source of error in peak Doppler velocity measurement显示文摘 | Lui E Y Steinman A H Cobbold R S | 2005 | Journal of Vascular Surgery2005，42，5： | 1 |
| 5 | Mammalian caspases: structure, activation, substractes and functions during apoptosis显示文摘 | WILLIAM C E LUIS M M SCOTT H K | 1999 | Annu Rev Biochem1999，68，： | 1 |
| 6 | Long-term treatment of plastic bronchitis with aerosolized tissue plasminogen activator in a Fontan patient显示文摘 | Wakeham Martin K Van Bergen Andrew H Tobrero Luis E | 2005 | Pediatric Critical Care Medicine2005，6，1： | 1 |
| 7 | Efficacy of eplerenone versus enalapril as monotherapy in systemic hypertension显示文摘 | Gordon H Williams Ellen Burgess Rainer E Kolloch Luis Miguel Ruilope Joanna Niegowska Mark S Kipnes Barbara Roniker Jeffrey L Patrick Scott L Krause | 2004 | The American Journal of Cardiology2004，，： | 1 |
| 8 | Human factors as a source of error in peak Doppler velocity measurement 显示文摘 | Lui E Y Steinman A H Cobbold R S | 2005 | J Vasc Surg2005，42，5： | 1 |
| 9 | Cloning and sequencing of the genes involved in glyphosate utilization by pseudomonas pseudomoallei 显示文摘 | ALEJANDRO P V GILDAL M LUIS H E | 1995 | Applied and Environmental Microbiology1995，61，2： | 1 |
| 10 | Cloning and sequencing of the genes involved in glyphosate utilization by pseudomonas pseudomallei显示文摘 | Alejandro P V Gildal M Luis H E | 1995 | Applied and Environmental Microbiology1995，61，2： | 1 |
| 11 | The role of nutrient availability inregulating root architecture显示文摘 | Jose L B Alfredo C R Luis H E | 2003 | Current Opinion in Plant Biology2003，6，： | 1 |
| 12 | Sensory quality of lowsugar orange gels with gellan,xanthan and locust bean gums显示文摘 | M H Damásio E Costell Luis Durán | 1997 | Zeitschrift für Lebensmitteluntersuchung und-Forschung A1997，3，11： | 1 |
| 13 | Production of Structured Triacylglycerols Rich in Palmitic Acid at Sn-2 Position and Oleic Acid at Sn-1,3 Positions as Human Milk Fat Substitutes by Enzymatic Acidolysis显示文摘 | LUIS E MARIA J J ESTRELLA H | 2011 | Biochemical Engineering Journal2011，54，1： | 1 |
| 14 | Muhifre- quency and dual-mode patch antennas partically filled with left-handed structures 显示文摘 | FRANCISCO J H M LUIS E G M DANIEL S V | 2008 | IEEE Transactions on Antennas and Propagation2008，56，8： | 1 |
| 15 | The role of nutrient availability in regulating root architecture显示文摘 | José L B Alfredo C R Luis H E | 2003 | Curr Opin Plant Biol2003，6，8： | 1 |
| 16 | Pedestrian de- tection and tracking using three-dimensional ladar data显示文摘 | Luis E N Christoph M Martial H | 2010 | The International Journal of Robotics Re- search2010，29，12： | 1 |
| 17 | Degradation of agranular base under a flexible pavement:DEM simulation显示文摘 | LUIS E V SEBASTIAN L G KEVIN H | 2006 | International Journal of Geomechanics2006，6，6： | 1 |
| 18 | The SARS coronavirus:A postgenomic era显示文摘 | Kathryn V H Luis E | 2003 | Science2003，300，5： | 1 |
| 19 | Production of structuredtriacylglycerols rich in palmitic acid at sn-2 position and oleic acid atsn-1,3 positions as human milk fat substitutes by enzymatic acidolysis显示文摘 | LUIS E MARIA J ESTRELLA H | 2011 | Biochemical Engineering Journal2011，54，： | 1 |
| 20 | A simplified system for generation recombinant adenoviruses显示文摘 | TONGCHUAN H E SHIBIN ZHOU LUIS T | 1998 | Proc Natl Acad Sci USA1998，95，： | 1 |
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