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| 1 | The Variation of Stone Cell Content in 236 Germplasms of Sand Pear(Pyrus pyrifolia)and Identification of Related Candidate Genes显示文摘Stone cells have been described to substantially influence pear fruit quality,as lignin and cellulose are the main components of stone cells.However,there are limited studies on the relationship between the variation and molecular basis of stone cells,lignin and cellulose content among different pear varieties.Here,to reveal the variation of stone cell content within different cultivated species,we collected 236 germplasms of sand pear(Pyrus pyrifolia)at 50 days after flower blooming(DAFB),the key stage of stone cell formation.In our results,we measured the content of stone cells,lignin and cellulose and found that these contents ranged from2.82%to 29.00%,8.84%to 55.30%and 11.52%to 30.55%,respectively.Further analysis showed that the variation coefficient of stone cell,lignin and cellulose content was 39.10%,28.03%and 16.71%,respectively.Additionally,a significant correlation between stone cell,lignin and cellulose content were detected,and the correlation coefficient between the contents of stone cell and lignin(0.912)was higher than between the contents of stone cell and cellulose(0.796).Moreover,the average lignin content(29.73%)was higher than the average cellulose content(18.03%)in stone cells in pear fruits,indicating that lignin is the main component of stone cell in pears.Finally,on the basic of the transcriptome data,we identified 10 transcription factors belonging to bHLH,ERF,MYB,and NAC transcript families,which might be involved in lignin formation in stone cells.qRT-PCR experiments verified coincident trends between expression of candidate genes and stone cell content.This research laid foundation for future studies on genetic variation of stone cells in pear fruits and provided important gene resources for stone cell regulation. | Jiaying Zhang Jiaming Li Cheng Xue Runze Wang Mingyue Zhang Kaijie Qi Jing Fan Hongju Hu Shaoling Zhang Jun Wu | 2021 | Horticultural Plant Journal2021，7，2： | 3 |
| 2 | The Solar Upper Transition Region Imager(SUTRI)Onboard the SATech-01 Satellite显示文摘The Solar Upper Transition Region Imager(SUTRI)onboard the Space Advanced Technology demonstration satellite(SATech-01),which was launched to a Sun-synchronous orbit at a height of~500 km in 2022 July,aims to test the on-orbit performance of our newly developed Sc/Si multi-layer reflecting mirror and the 2k×2k EUV CMOS imaging camera and to take full-disk solar images at the Ne VII 46.5 nm spectral line with a filter width of~3 nm.SUTRI employs a Ritchey-Chrétien optical system with an aperture of 18 cm.The on-orbit observations show that SUTRI images have a field of view of~416×416 and a moderate spatial resolution of~8″without an image stabilization system.The normal cadence of SUTRI images is 30 s and the solar observation time is about16 hr each day because the earth eclipse time accounts for about 1/3 of SATech-01's orbit period.Approximately15 GB data is acquired each day and made available online after processing.SUTRI images are valuable as the Ne VII 46.5 nm line is formed at a temperature regime of~0.5 MK in the solar atmosphere,which has rarely been sampled by existing solar imagers.SUTRI observations will establish connections between structures in the lower solar atmosphere and corona,and advance our understanding of various types of solar activity such as flares,filament eruptions,coronal jets and coronal mass ejections. | Xianyong Bai Hui Tian Yuanyong Deng Zhanshan Wang Jianfeng Yang Xiaofeng Zhang Yonghe Zhang Runze Qi Nange Wang Yang Gao Jun Yu Chunling He Zhengxiang Shen Lun Shen Song Guo Zhenyong Hou Kaifan Ji Xingzi Bi Wei Duan Xiao Yang Jiaben Lin Ziyao Hu Qian Song Zihao Yang Yajie Chen Weidong Qiao Wei Ge Fu Li Lei Jin Jiawei He Xiaobo Chen Xiaocheng Zhu Junwang He Qi Shi Liu Liu Jinsong Li Dongxiao Xu Rui Liu Taijie Li Zhenggong Feng Yamin Wang Chengcheng Fan Shuo Liu Sifan Guo Zheng Sun Yuchuan Wu Haiyu Li Qi Yang Yuyang Ye Weichen Gu Jiali Wu Zhe Zhang Yue Yu Zeyi Ye Pengfeng Sheng Yifan Wang Wenbin Li Qiushi Huang Zhong Zhang | 2023 | Research in Astronomy and Astrophysics2023，23，6： | 1 |
| 3 | Homotypic clustering of L1 and B1/Alu repeats compartmentalizes the 3D genome显示文摘Organization of the genome into euchromatin and heterochromatin appears to be evolutionarily conserved and relatively stable during lineage differentiation.In an effort to unravel the basic principle underlying genome folding,here we focus on the genome itself and report a fundamental role for L1(LINE1 or LINE-1)and B1/Alu retrotransposons,the most abundant subclasses of repetitive sequences,in chromatin compartmentalization.We find that homotypic clustering of L1 and B1/Alu demarcates the genome into grossly exclusive domains,and characterizes and predicts Hi-C compartments.Spatial segregation of L1-rich sequences in the nuclear and nucleolar peripheries and B1/Alu-rich sequences in the nuclear interior is conserved in mouse and human cells and occurs dynamically during the cell cycle.In addition,de novo establishment of L1 and B1 nuclear segregation is coincident with the formation of higher-order chromatin structures during early embryogenesis and appears to be critically regulated by L1 and B1 transcripts.Importantly,depletion of L1 transcripts in embryonic stem cells drastically weakens homotypic repeat contacts and compartmental strength,and disrupts the nuclear segregation of L1-or B1-rich chromosomal sequences at genome-wide and individual sites.Mechanistically,nuclear co-localization and liquid droplet formation of L1 repeat DNA and RNA with heterochromatin protein HP1αsuggest a phase-separation mechanism by which L1 promotes heterochromatin compartmentalization.Taken together,we propose a genetically encoded model in which L1 and B1/Alu repeats blueprint chromatin macrostructure.Our model explains the robustness of genome folding into a common conserved core,on which dynamic gene regulation is overlaid across cells. | J.Yuyang Lu Lei Chang Tong Li Ting Wang Yafei Yin Ge Zhan Xue Han Ke Zhang Yibing Tao Michelle Percharde Liang Wang Qi Peng Pixi Yan Hui Zhang Xianju Bi Wen Shao Yantao Hong Zhongyang Wu Runze Ma Peizhe Wang Wenzhi Li Jing Zhang Zai Chang Yingping Hou Bing Zhu Miguel Ramalho-Santos Pilong Li Wei Xie Jie Na Yujie Sun Xiaohua Shen | 2021 | Cell Research2021，31，6： | 1 |
| 4 | Genomic selection of eight fruit traits in pear显示文摘Genomic selection (GS) has the potential to improve selection efficiency and shorten the breeding cycle in fruit tree breeding. In this study,we evaluated the effect of prediction methods, marker density and the training population (TP) size on pear GS for improving its performance and reducing cost. We evaluated GS under two scenarios:(1) five-fold cross-validation in an interspecific pear family;(2) independent validation. Based on the cross-validation scheme, the prediction accuracy (PA) of eight fruit traits varied between 0.33 (fruit core vertical diameter)and 0.65 (stone cell content). Except for single fruit weight, a slightly better prediction accuracy (PA) was observed for the five parametrical methods compared with the two non-parametrical methods. In our TP of 310 individuals, 2 000 single nucleotide polymorphism (SNP) markers were sufficient to make reasonably accurate predictions. PAs for different traits increased by 18.21%-46.98%when the TP size increased from 50to 100, but the increment was smaller (-4.13%-33.91%) when the TP size increased from 200 to 250. For independent validation, the PAs ranged from 0.11 to 0.45 using rrBLUP method. In summary, our results showed that the TP size and SNP numbers had a greater impact on the PA than prediction methods. Furthermore, relatedness among the training and validation sets, and the complexity of traits should be considered when designing a TP to predict the test panel. | Manyi Sun Mingyue Zhang Satish Kumar Mengfan Qin Yueyuan Liu Runze Wang Kaijie Qi Shaoling Zhang Wenjing Chang Jiaming Li Jun Wu | 2024 | Horticultural Plant Journal2024，10，2： | 0 |
| 5 | Consecutive Methylation Catalyzed by TsrM,an Atypical Class B Radical SAM Methylase显示文摘TsrM is a cobalamin-dependent radical S-adenosylmethionine(SAM)methyltransferase belonging to the Class B radical SAM methylase(RSM)family.This enzyme catalyzes the C-2 methylation of L-tryptophan to produce 2-methyltrytophan(2-MeTrp),an intermediate involved in the biosynthesis of thiostrepton A.In this work,we report characterization of an unexpected activity of TsrM,which carries out an additional methylation reaction on the product 2-MeTrp.A series of isotopic labeling studies and assays with different Trp analogs revealed that TsrM is able to transfer a methyl group from SAM to the C4 of 2-MeTrp to produce 2,4-dimethyltryptophan.These results reveal the intriguing substrate specificity of TsrM,further expanding the reaction promiscuity of the radical SAM superfamily enzymes. | Runze Wu Wei Ding Qi Zhang | 2022 | Chinese Journal of Chemistry2022，40，14： | 0 |
| 6 | Phosphate-dependent regulation of vacuolar trafficking of OsSPX-MFSs is critical for maintaining intracellular phosphate homeostasis in rice显示文摘Vacuolar storage of inorganic phosphate(Pi)is essential for Pi homeostasis in plants.The SPX-MFS family proteins have been demonstrated to be vacuolar Pi transporters in many plant species.Transcriptional regulation of the predominant transporter among rice SPX-MFSs,OsSPX-MFS3,was only moderately suppressed by Pi starvation.Thus,post-transcriptional mechanisms were hypothesized to regulate the activity of OsSPX-MFS3.In this study,we found that the tonoplast localization of OsSPX-MFSs is inhibited under Pi-depleted conditions,resulting in their retention in the pre-vacuolar compartments(PVCs).A yeast two-hybrid screen identified that two SNARE proteins,OsSYP21 and OsSYP22,interact with the MFS domain of OsSPX-MFS3.Further genetic and cytological analyses indicate that OsSYP21 and OsSYP22 facilitate trafficking of OsSPX-MFS3 from PVCs to the tonoplast.Although a homozygous frameshift mutation in OsSYP22 appeared to be lethal,tonoplast localization of OsSPX-MFS3 was significantly inhibited in transgenic plants expressing a negative-dominant form of OsSYP22(OsSYP22-ND),resulting in reduced vacuolar Pi concentrations in OsSYP22-ND plants.Under Pi-depleted conditions,the interaction between OsSYP22 and OsSPX-MFS3 was disrupted,and this process depended on the presence of the SPX domain.Deleting the SPX domains of OsSPX-MFSs resulted in their tonoplast localization under both Pi-depleted and Pi-replete conditions.Complementation of the osspx-mfs1/2/3 triple mutants with the MFS domain or the SPX domain of OsSPX-MFS3 confirmed that the MFS and SPX domains are responsive to Pi transport activity and Pi-dependent regulation,respectively.These data indicated that the SPX domains of OsSPX-MFSs sense cellular Pi(InsP)levels and,under Pi-depleted conditions,inhibit the interaction between OsSPX-MFSs and OsSYP21/22 and subsequent trafficking of OsSPX-MFSs from PVCs to the tonoplast. | Runze Guo Qi Zhang Kun Qian Yinghui Ying Wenying Liao Lening Gan Chuanzao Mao Yong Wang James Whelan Huixia Shou | 2023 | Molecular Plant2023，16，8： | 0 |
| 7 | Design,Fabrication and Assembly of the Solar Upper Transition Region Imager(SUTRI)显示文摘The Solar Upper Transition Region Imager(SUTRI)focuses on the solar transition region to achieve dynamic imaging observation of the upper transition region.In this paper,we report the optical system design,mechanical design,ultrasmooth mirror manufacture and measurement,EUV multilayer film coating,prelaunch installation and calibration for the SUTRI payload at IPOE,Tongji University.Finally,the SUTRI carried by the SATech-01 satellite was successfully set to launch.All functions of this telescope were normal,and the observation results obtained in orbit were consistent with the design. | Zhanshan Wang Jun Yu Runze Qi Chunling He Zhengxiang Shen Li Jiang Weichen Gu Jiali Wu Zhe Zhang Pengfeng Sheng Yifan Wang Yue Yu Zeyi Ye JingJing Xia Yujie Xing Hongfei Jiao Bin Ma Qiushi Huang Zhong Zhang Xianyong Bai Yuanyong Deng Hui Tian Nange Wang Lun Shen Song Guo Lei Jing Xiaobo Chen Yang Gao Xiaocheng Zhu Xiaofeng Zhang Junwang He Qi Shi Shuo Liu Xingzi Bi | 2023 | Research in Astronomy and Astrophysics2023，23，9： | 0 |
| 8 | Lanchester equation for cognitive domain using hesitant fuzzy linguistic terms sets显示文摘Intelligent wars can take place not only in the physical domain and information domain but also in the cognitive domain.The cognitive domain will become the key domain to win in the future intelligent war.A Lanchester equation considering cognitive domain is proposed to fit the development tendency intelligent wars in this paper.One party is considered to obtain the exponential enhancement advantage on combat forces in combat if it can gain an advantage in the cognitive domain over the other party according to the systemic advantage function.The operational effectiveness of the cognitive domain in war is considered to consist of a series of indicators.Hesitant fuzzy sets and linguistic term sets are powerful tools when evaluating indicators,hence the indicators are scored by experts using hesitant fuzzy linguistic terms sets here.A unique hesitant fuzzy hybrid arithmetical averaging operator is used to aggregate the evaluation. | HAN Qi LI Weimin XU Qiling ZHAO Minrui HUO Runze ZHANG Tao | 2022 | Journal of Systems Engineering and Electronics2022，33，3： | 0 |
| 9 | Protective performance test and safety risk evaluation of a powered air-purifying suit显示文摘The positive pressure biological protective suit is the highest degree of personal protective equipment, and its performance directly impacts the health and safety of the wearer. Protection factor is the most critical measure of the performance of a positive pressure bio-protective suit. This study establishes a dynamic detection system for the positive pressure bio-protective suit, to evaluate its safety risks, and explores methods to reduce these risks. A manikin was used to perform human actions, such as raising the arms, sitting, and walking, that were simulated at different levels. Integrity breaches of different shapes and sizes were made to different parts of the suit for evaluation. The aerosol concentration and the pressure of the suit were detected. Positive-pressure suits provide exceptionally good protection even in accident scenarios and provide a greater flexibility and more ergonomic benefits. However, sufficiently large (>3 cm) breaches caused a negative-pressure and an inward airflow during vigorous activities. The location of the breach site on the suit also had a significant effect on bio-aerosol leakage. Studies have shown that effective methods to avoid the risk of damage include increasing the air supply flow and performing gentle movements while wearing the suit. The dynamic detection method and the results obtained in this study are a significant advance to predict and avoid the risks associated with powered air-purifying suits. | Hao Limei Qi Jiancheng Wang Runze Yi Ying Wu Jinhui | 2019 | Biosafety and Health2019，1，2： | 0 |
| 10 | Narrowband EUV Sc/Si Multilayer for the Solar Upper Transition Region Imager at 46.5 nm显示文摘The transition region is the key region between the lower solar atmosphere and the corona, which has been limitedly understood by human beings. Therefore, the Solar Upper Transition Region Imager(SUTRI) was proposed by Chinese scientists and launched in 2022 July. Right now, the first imaging observation of the upper transition region around 46.5 nm has been carried out by SUTRI. To ensure the spectral and temporal resolution of the SUTRI telescope, we have developed a narrowband Sc/Si multilayer. Based on the extreme ultraviolet(EUV)reflectivity measurements, the multilayer structure has been modified for ensuring the peak position of reflectivity was at 46.5 nm. Finally, the narrowband Sc/Si multilayer was successfully deposited on the hyperboloid primary mirror and secondary mirrors. The deviation of multilayer thickness uniformity was below than 1%, and the average EUV reflectivity at 46.1 nm was 27.8% with a near-normal incident angle of 5°. The calculated bandwidth of the reflectivity curve after primary and secondary mirrors was 2.82 nm, which could ensure the requirements of spectral resolution and reflectivity of SUTRI telescope to achieve its scientific goals. | Runze Qi Jiali Wu Jun Yu Chunling He Li Jiang Yue Yu Zhe Zhang Qiushi Huang Zhong Zhang Zhanshan Wang | 2023 | Research in Astronomy and Astrophysics2023，23，10： | 0 |
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